PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_35186-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 478aa    MW: 53207.9 Da    PI: 4.9545
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_35186-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.35.6e-13289336355
                      HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                      ++h   ErrRR+++N+ f  L++l+P+ +      K++Ka+iL +++ Y+k+L+
  TRIUR3_35186-P1 289 KTHVLSERRRREKLNEMFLVLKSLVPSiN------KMDKASILAETITYLKELE 336
                      58999**********************77......****************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.431286335IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.85E-14289340No hitNo description
SuperFamilySSF474596.8E-18289347IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-10289336IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.4E-18290344IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.2E-16292341IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 478 aa     Download sequence    Send to blast
MALSAAPAGQ APPPGKQLSY QLAAASSNVE GRVLQRRGKD EEDHKLEQLR ELYESLLSGK  60
ADHRARRPAA SLSPEDLGEA EWYTYSFRPG QGISMDDSIN GGGGVRLEYD GTPGRTSFWE  120
LPFQACLESE APSSSPSTNE TRNREVEIVV FEDLDHNVAK GFISELGEVE SMSDANINCI  180
TTEEVDEFYG LIEELDVCAL EDNWVMERSF EFMSSLEMAP DMDAPRIDDN TITLSSSVNG  240
SRPSCFTIWK RSSDWEGMDV RDPGESQKLL KKVVAGGGWT MRAQESNIKT HVLSERRRRE  300
KLNEMFLVLK SLVPSINKMD KASILAETIT YLKELEQRVE ELESSRPPSW HPKEAAGRGL  360
HDVAGRKKIK QSTGCKRKAP ESEREDDDGP SNVVNVTMMD KEVILEVQCR WKKLLMKRVF  420
DAIKSLHLDI VSVHTSTPGG LLDLKIRATH QVAASSATVA PGMITEALQK AISNHWQN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1294299ERRRRE
2295300RRRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012703043.11e-125PREDICTED: anthocyanin regulatory R-S protein-like
SwissprotP135263e-95ARLC_MAIZE; Anthocyanin regulatory Lc protein
TrEMBLM8B3830.0M8B383_TRIUA; Anthocyanin regulatory Lc protein
STRINGSi000845m1e-122(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP93233109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63650.35e-33bHLH family protein